Assoc. Prof. AHMET FATİH TABAK

MICROMACHINES , vol.16, no.1, pp.1-21, 2025 (SCI-Expanded) Sustainable Development

2. MESENCHYMAL STEM CELL DIFFUSION INTEGRATED MECHANO- BIOLOGY ANALYSIS OF 3D SCAFFOLDS

Sahin M., Tabak A. F., Sendur G. K., Ghassabi A. A.

TISSUE ENGINEERING - PART A , vol.29, no.11-12, pp.1391, 2023 (SCI-Expanded) Sustainable Development

3. Transducer Technologies for Biosensors and Their Wearable Applications

Polat E. O., Cetin M. M., TABAK A. F., Güven E. B., Uysal B. Ö., Arsan T., et al.

Biosensors , vol.12, no.6, 2022 (SCI-Expanded, Scopus)

4. Simulation Studies for Motion Control of Multiple Biohybrid Microrobots in Human Synovial Fluid with Discontinuous Reference Signals

International journal of advances in engineering and pure sciences (Online) , vol.3, pp.1-9, 2021 (TRDizin) Sustainable Development

5. Non-Contact Micromanipulation Of A Single E. Coli Minicell

Sürer J., TABAK A. F.

Avrupa Bilim ve Teknoloji Dergisi , no.26, pp.16-21, 2021 (TRDizin)

6. Bernoulli-Equation-Based Robotic Model for Non-Contact Magnetic Micromanipulation

Sürer J., Tabak A. F.

Avrupa Bilim ve Teknoloji Dergisi , no.24, pp.47-52, 2021 (TRDizin) Sustainable Development

7. Bilateral control simulations for a pair of magnetically-coupled robotic arm and bacterium for in vivo applications

Journal of Micro-Bio Robotics , vol.16, no.2, pp.199-214, 2020 (ESCI, Scopus) Sustainable Development

8. Independent Joint Control Simulations on Adaptive Maneuvering of a Magnetotactic Bacterium via a Single Permanent Magnet

Avrupa Bilim ve Teknoloji Dergisi , vol.0, pp.50-59, 2020 (TRDizin) Sustainable Development

9. Elevation and Azimuth Rotational Actuation of an Untethered Millirobot by MRI Gradient Coils

Erin O., Gilbert H. B., Tabak A. F., Sitti M.

IEEE Transactions on Robotics , vol.35, no.6, pp.1323-1337, 2019 (SCI-Expanded, Scopus) Sustainable Development

10. Temperature Gradients Drive Bulk Flow Within Microchannel Lined by Fluid–Fluid Interfaces

Amador G. J., Ren Z., Tabak A. F., Alapan Y., Yasa O., Sitti M.

Small , vol.15, no.21, 2019 (SCI-Expanded, Scopus) Sustainable Development

11. 3D-Printed Microrobotic Transporters with Recapitulated Stem Cell Niche for Programmable and Active Cell Delivery

Yasa I. C., Tabak A. F., Yasa O., Ceylan H., Sitti M.

Advanced Functional Materials , vol.29, no.17, 2019 (SCI-Expanded, Scopus) Sustainable Development

12. 3D-Printed Biodegradable Microswimmer for Theranostic Cargo Delivery and Release

Ceylan H., Yasa I. C., Yasa O., Tabak A. F., Giltinan J., Sitti M.

ACS Nano , vol.13, no.3, pp.3353-3362, 2019 (SCI-Expanded, Scopus) Sustainable Development

13. Hydrodynamic Impedance Correction for Reduced-Order Modeling of Spermatozoa-Like Soft Micro-Robots

Advanced Theory and Simulations , vol.2, no.2, 2019 (SCI-Expanded, Scopus)

14. Controllable switching between planar and helical flagellar swimming of a soft robotic sperm

Khalil I. S., Tabak A. F., Seif M. A., Klingner A., Sitti M.

PLoS ONE , vol.13, no.11, 2018 (SCI-Expanded, Scopus)

15. Independent actuation of two-tailed microrobots

Khalil I. S., Tabak A. F., Hamed Y., Tawakol M., Klingner A., Gohary N. E., et al.

IEEE Robotics and Automation Letters , vol.3, no.3, pp.1703-1710, 2018 (Scopus) Sustainable Development

16. Soft erythrocyte-based bacterial microswimmers for cargo delivery

Alapan Y., Yasa O., Schauer O., Giltinan J., Tabak A. F., Sourjik V., et al.

Science Robotics , vol.3, no.17, 2018 (SCI-Expanded, Scopus) Sustainable Development

17. Hydrodynamic Impedance of Bacteria and Bacteria-Inspired Micro-Swimmers: A New Strategy to Predict Power Consumption of Swimming Micro-Robots for Real-Time Applications

Advanced Theory and Simulations , vol.1, no.4, 2018 (Scopus) Sustainable Development

18. Mechanical Rubbing of Blood Clots Using Helical Robots Under Ultrasound Guidance

Khalil I. S. M., Mandy D., El Sharkawy A., Moustafa R. R., Tabak A. F., Mitwall M. E., et al.

IEEE Robotics and Automation Letters , vol.3, no.2, pp.1112-1119, 2018 (Scopus) Sustainable Development

19. Swimming Back and Forth Using Planar Flagellar Propulsion at Low Reynolds Numbers

Khalil I. S. M., TABAK A. F., Hamed Y., Mitwally M. E., Tawakol M., Klingner A., et al.

Advanced Science , vol.5, no.2, 2018 (SCI-Expanded, Scopus)

20. Rubbing Against Blood Clots Using Helical Robots: Modeling and In Vitro Experimental Validation

Khalil I. S. M., Tabak A. F., Sadek K., Mahdy D., Hamdi N., Sitti M.

IEEE Robotics and Automation Letters , vol.2, no.2, pp.927-934, 2017 (Scopus) Sustainable Development

21. Magnetic propulsion of robotic sperms at low-Reynolds number

Khalil I. S., Tabak A. F., Klingner A., Sitti M.

Applied Physics Letters , vol.109, no.3, 2016 (SCI-Expanded, Scopus) Sustainable Development

22. Computationally-validated surrogate models for optimal geometric design of bio-inspired swimming robots: HELICAL swimmers

Computers and Fluids , vol.99, pp.190-198, 2014 (SCI-Expanded, Scopus)

23. Improved kinematic models for two-link helical micro/nanoswimmers

IEEE Transactions on Robotics , vol.30, no.1, pp.14-25, 2014 (SCI-Expanded, Scopus) Sustainable Development

24. Simulation-based analysis of flow due to traveling-plane-wave deformations on elastic thin-film actuators in micropumps

ŞAHİN M., TABAK A. F., KIZILTAŞ ŞENDUR G.

Microfluidics and Nanofluidics , vol.4, no.6, pp.489-500, 2008 (SCI-Expanded, Scopus)

Papers Presented at Peer-Reviewed Scientific Conferences 32

1. Analysis of functionally graded and uniform scaffolds based on mechano-biology and cell diffusion

Virtual Physiological Human-VPH 2022, Porto, Portugal, 6 - 09 September 2022, (Summary Text)

2. Numerical Investigations on the Hydrodynamic Interaction between an E. Coli Minicell and a Micro Tweezers

The IEEE (Türkiye Section) Innovations in Intelligent Systems and Applications Conference (ASYU2021), Elazığ, Turkey, 6 - 08 October 2021, (Full Text)

3. Simulated Motion Control of a School of Microrobots with Random Walks

ŞAHİN M., TABAK A. F., KIZILTAŞ ŞENDUR G.

The IEEE (Türkiye Section) 6th International Symposium on Multidisciplinary Studies and Innovative Technologies (ISMSIT2022), Ankara, Turkey, 20 - 22 October 2021, (Full Text)

4. Orbital characterization study for the hydrodynamic micro tweezers: simulated performance with a passive particle

Sürer J., DÜZENLİ S., TABAK A. F.

The IEEE (Türkiye Section) 5th International Symposium on Multidisciplinary Studies and Innovative Technologies (ISMSIT2021), Bolu, Turkey, 21 - 23 October 2021, (Full Text)

5. Orbital characterization study for the hydrodynamic micro tweezers: simulated performance with an active particle

DÜZENLİ S., Sürer J., TABAK A. F.

The IEEE (Türkiye Section) 5th International Symposium on Multidisciplinary Studies and Innovative Technologies (ISMSIT2021), Bolu, Turkey, 21 - 23 October 2021, (Full Text)

6. Initial Study Towards the Integrated Design of Bone Scaffolds Based on Cell Diffusion, Growth Factor Release and Tissue Regeneration

The ASME 2020 International Mechanical Engineering Congress and Exposition (IMECE), OR, Portland, United States Of America, 16 - 20 November 2020, (Full Text)

7. Motion Control for Biohybrid Multiscale Robots

2020 Innovations in Intelligent Systems and Applications Conference, ASYU 2020, İstanbul, Turkey, 15 - 17 October 2020, (Full Text)

8. A Simulated Control Method for a Magnetically-Coupled Bacterium and Robotic Arm

2020 International Conference on Manipulation, Automation, and Robotics at Small Scales, MARSS 2020, Toronto, Canada, 13 - 17 July 2020, (Full Text)

9. Adaptive Motion Control of Modified E. Coli

2nd International Congress on Human-Computer Interaction, Optimization and Robotic Applications, HORA 2020, Ankara, Turkey, 26 - 27 June 2020, (Full Text)

10. Simulated Bilateral Motion Control of a Magneto-Tactic Bacterium via an Open Kinematic Chain

17th International Conference on Ubiquitous Robots, UR 2020, Kyoto, Japan, 22 - 26 June 2020, pp.587-592, (Full Text)

11. Manipulation of Non-Magnetic Microbeads Using Soft Microrobotic Sperm

El-Etriby A. E., Klingner A., TABAK A. F., Khalil I. S.

3rd International Conference on Manipulation, Automation and Robotics at Small Scales, MARSS 2018, Nagoya, Japan, 4 - 08 July 2018, (Full Text)

12. Swimming in low reynolds numbers using planar and helical flagellar waves

Khalil I. S. M., TABAK A. F., Seif M. A., Klingner A., Adel B., Sitti M.

2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2017, Vancouver, Canada, 24 - 28 September 2017, vol.2017-September, pp.1907-1912, (Full Text)

13. Positioning of drug carriers using permanent magnet-based robotic system in three-dimensional space

Khalil I. S., Alfar A., TABAK A. F., Klingner A., Stramigioli S., Sitti M.

2017 IEEE International Conference on Advanced Intelligent Mechatronics, AIM 2017, Munich, Germany, 3 - 07 July 2017, pp.1117-1122, (Full Text)

14. Near-surface effects on the controlled motion of magnetotactic bacteria

Khalil I. S. M., TABAK A. F., Hageman T., Ewis M., Pichel M., Mitwally M. E., et al.

2017 IEEE International Conference on Robotics and Automation, ICRA 2017, Singapore, Singapore, 29 May - 03 June 2017, pp.5976-5982, (Full Text)

15. Targeting of cell mockups using sperm-shaped microrobots in vitro

Khalil I. S. M., TABAK A. F., Hosney A., Klingner A., Shalaby M., Abdel-Kader R. M., et al.

6th IEEE RAS/EMBS International Conference on Biomedical Robotics and Biomechatronics, BioRob 2016, Singapore, Singapore, 26 - 29 June 2016, vol.2016-July, pp.495-501, (Full Text)

16. Sperm-shaped magnetic microrobots: Fabrication using electrospinning, modeling, and characterization

Khalil I. S. M., TABAK A. F., Hosney A., Mohamed A., Klingner A., Ghoneima M., et al.

2016 IEEE International Conference on Robotics and Automation, ICRA 2016, Stockholm, Sweden, 16 - 21 May 2016, vol.2016-June, pp.1939-1944, (Full Text)

17. Dar kanallar içerisinde hareket eden manyetik mikro yüzücülerin direnç-kuvveti-teorisi tabanlı modellemesi

Erman A. G., TABAK A. F.

2014 Türkiye Otomatik Kontrol Ulusal Toplantısı (TOK), Kocaeli, Turkey, 11 - 13 September 2014, (Full Text)

18. Resistive force theory based modeling and simulation of surface contact for swimming helical micro robots with channel flow

Erman A., Tabak A. F.

2014 IEEE/ASME International Conference on Advanced Intelligent Mechatronics, AIM 2014, Besançon, France, 8 - 11 July 2014, pp.390-395, (Full Text)

19. In-channel experiments on vertical swimming with bacteria-like robots

TABAK A. F., BOZKURT A., YEŞİLYURT S.

2013 26th IEEE/RSJ International Conference on Intelligent Robots and Systems: New Horizon, IROS 2013, Tokyo, Japan, 3 - 08 November 2013, pp.4596-4601, (Full Text)

20. Yürüyen düzlem dalgaların piezoseramikler ile implementasyonu

2013 Türkiye Otomatik Kontrol Ulusal Toplantısı, Malatya, Turkey, 26 - 30 September 2013, (Full Text)

21. Experimental validation of a CFD-based resistive force coefficient set for rotating helical tails in cylindrical Channels

7th Subrata Chakrabarti International Conference on Fluid Structure Interaction, FSI 2013, Gran Canaria, Spain, 10 - 12 April 2013, vol.129, pp.201-213, (Full Text)

22. Experiments on in-channel swimming of an untethered biomimetic robot with different helical tails

2012 4th IEEE RAS and EMBS International Conference on Biomedical Robotics and Biomechatronics, BioRob 2012, Rome, Italy, 24 - 27 June 2012, pp.556-561, (Full Text)

23. Experiment-based Kinematic validation of numeric modeling and simulated control of an untethered biomimetic Microrobot in channel

Tabak A. F., Temel F. Z., Yesilyurt S.

2012 12th IEEE International Workshop on Advanced Motion Control, AMC 2012, Sarajevo, Bosnia And Herzegovina, 25 - 27 March 2012, (Full Text)

24. Comparison on experimental and numerical results for helical swimmers inside channels

2011 IEEE/RSJ International Conference on Intelligent Robots and Systems: Celebrating 50 Years of Robotics, IROS'11, San Francisco, CA, United States Of America, 25 - 30 September 2011, pp.463-468, (Full Text) Sustainable Development

25. Validated reduced order models for simulating trajectories of bio-inspired artificial micro-swimmers

ASME 2010 8th International Conference on Nanochannels, Microchannels, and Minichannels, ICNMM2010 Collocated with 3rd Joint US-European Fluids Engineering Summer Meeting, Montreal, Canada, 1 - 05 August 2010, pp.57-63, (Full Text)

26. Modeling and Simulations of the Motion of Bio-Inspired Micro Swimming Robots

TABAK A. F., Yeşilyurt S.

ASME 2010 First Global Congress on NanoEngineering for Medicine and Biology, Houston, Texas, United States Of America, 7 - 10 February 2010, (Summary Text)

27. Simulation-based analysis of 3D flow inside a micropump with passive valves

TABAK A. F., Solak A., Erdem E., Akcan C., Yesilyurt S.

ASME International Mechanical Engineering Congress and Exposition, IMECE 2007, Seattle, WA, United States Of America, 11 - 15 November 2007, vol.11 PART B, pp.849-856, (Full Text)

28. Numerical analysis of a planar wave propagation based micropropulsion system

ASME International Mechanical Engineering Congress and Exposition, IMECE 2007, Seattle, WA, United States Of America, 11 - 15 November 2007, vol.11 PART B, pp.781-790, (Full Text)

29. Numerical Analysis of the 3D Flow Induced by Propagation of Plane-Wave Deformations on Thin Membranes Inside Microchannels

TABAK A. F., Yeşilyurt S.

ASME 5th International Conference on Nanochannels, Microchannels, and Minichannels (ICNMM), Puebla, Mexico, 18 - 20 June 2007, (Full Text)

30. Numerical simulations and analysis of a micropump actuated by traveling plane waves

Microfluidics, BioMEMS, and Medical Microsystems V, San Jose, CA, United States Of America, 22 - 24 January 2007, vol.6465, (Full Text)

31. Simulation-based analysis of 3D flow inside a micropump with passive valves

Tabak A. F., Solak A., Erdem E., Akcan C., Yesilyurt S.

ASME 2007 International Mechanical Engineering Congress and Exposition, IMECE 2007, Washington, United States Of America, 11 - 15 November 2007, vol.11, pp.849-856, (Full Text) Sustainable Development

32. Numerical analysis of a planar wave propagation based micropropulsion system

TABAK A. F., Yeşilyurt S.

ASME 2007 International Mechanical Engineering Congress and Exposition, IMECE 2007, Washington, United States Of America, 11 - 15 November 2007, vol.11, pp.781-790, (Full Text)

Books 4

1. Mathematical modeling to the motion control of magnetic nano/microrobotic tools performing in bodily fluids, especially blood/plasma

in: Nanotechnology for Hematology, Blood Transfusion, and Artificial Blood, Denizli,A,Nguyen,T A,Rajan,M,Alam,M F,Rahman K, Editor, Elsevier BV Academic Press, Amsterdam, pp.83-112, 2022 Sustainable Development

2. Chapter Twelve - Bioinspired and Biomimetic Micro-Robotics for Therapeutic Applications

in: Handbook of Biomechatronics, Segil J, Editor, Elsevier Inc., Amsterdam, pp.457-523, 2019 Sustainable Development

3. Simulations on traveling-plane-wave-based micropumps and microswimmers: Modeling flow-fields and rigid-body kinematics of fully-submerged bio-inspired microsystems with deforming extremities

LAP Lambert Academic Publishing GmbH Co. KG, 2016

4. Numerical experiment-based modeling for bio-inspired microswimmers: Modeling hydrodynamic interactions acting on individual bio-inspired microswimmer